http://www.amiravis.com/documentation/521/amira/usersguide/tutmatlab.html

In this tutorial you will learn how to integrate complex calculus into Amira using MATLAB (The MathWorks, Inc) by the means of the CalculusMatlab module.

In order to use the CalculusMatlab module, MATLAB 7 must be correctly installed on your computer. The CalculusMatlab module establishes a connection to the MATLAB computational engine that was registered during installation. If you did not register during installation, on the Windows command line you can enter the command:

• matlab /regserver

The limitations of the CalculusMatlab module are listed in its documentation.

This tutorial covers the following topics:

1. Loading and executing a MATLAB script.


2. Lowpass filtering on images.


3. Controlling the script with a time slider.


4. Thresholding on a volume.

In this section we will learn how to apply a lowpass filter on an Amira image using the MATLAB Fourier transformation. This example shows how to pass data and control variables from Amira to